Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQRKMEQIINDIEKLEVFPEVGFDADEKYGSEISNYHSTRGYTLSKDYIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
2V36 Chain:A ((141-230))
----KGTAVGVPGTLKGLEEALDKW--------GTRSMKQLITPSIKLA---EKGFPIDSVLAEAISDYQEKLSRTAAKDVFLPNGEPLKEGDTLI------QKDLAKTFK
General information:
TITO was launched using:
RESULT:
Template:
2V36.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7135 for 488 contacts (14.6/contact) +
2D Compatibility (PS) -8846 + (NN) 2762 + (LL) 824
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: -775.0 ( -1.59 by residue)
QMean score : 0.158
(partial model without unconserved sides chains):
PDB file :
Tito_2V36.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2V36-query.scw
PDB file :
Tito_Scwrl_2V36.pdb
: