Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEISLLTDIGQRRSNNQDFINQFENKAGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELS-EIRDWMLVSIETENRKIY-ELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAGQLTEEEAASHPQKNIITQSIGQANPVEPDLGVHLLEEGDYLVVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANHRGGLDNITVALVYVESEAV |
2CM1 Chain:A ((34-247)) | ------SDRGLVRANNEDSV-----YAGARLLALADGMGGHAAGEVASQLVIAAL----AHLDDDEPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRITPEEAH------LIMRAL-TGHEVEPTLTMREARAGDRYLLCSDGLSDPVSDETILEAL-QIPEVAESAHRLIELALRGGGPDNVTVVVADVVD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CM1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62186 for 1683 contacts (-36.9/contact) +
2D Compatibility (PS) -21984 + (NN) -8811 + (LL) 796
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -107485.0 ( -63.87 by residue)
QMean score : 0.420
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