Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFASPSRYIQGKDALFQSIEHIKSLGQTPLILCDDVVYNIVGERFLSYLQDDLLPHRVS-FNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKVNLPVVIAPTVASTDAPTSALSVIYTDEGAFEKYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAACDAKVVTKALENVIEANTLLSGLGFESAGLAAAHAIHNGFTALSGDIHHLTHGEKVAYGTLTQLFLENRPKEEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGETIHEMPFKISAEDVAAALLTVDR----YVSNHQ |
| 4MCA Chain:A ((2-367)) | LRIIQSPGKYIQGANALAAVGQYAKSLADHYLVIADDFVMKLAGDTLMGSLQQHGVKHHAALFNGECCHKEIDRLGRELKAHGCRGVIGVGGGKTLDTAKAIAHYQQLPVVLIPTIASTDAPTSALSVIYTEQGEFAEYLIYPRNPDMVVMDVAIIAKAPVRLLVAGMGDALSTYFEAQACFDAQATSMAGGKSTLAALSLARLCYDTLLAEGVKAKLAVEAGVVTEAVERIIEANTYLSGIGFESSGLAAAHAIHNGFTVLE-ECHHLYHGEKVAFGTLAQLVLQNSPMAQIETVLAFCHRIGLPITLAEMGVSGDAVEKIMAVAQASCAAGETIHNMPFKVTPAGVQAAILTADRLGSAWLQQHQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214199 for 3386 contacts (-63.3/contact) +
2D Compatibility (PS) -39328 + (NN) -20880 + (LL) -172
1D Compatibility (HY) -36400 + (ID) 8750
Total energy: -319729.0 ( -94.43 by residue)
QMean score : 0.589
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