Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKYSIRGENIEVTEAIREYVETKLSKVEKYFNEAQELDTRVNLKV--YREKTAKVEVTILIDSITLRAEDVSQDMYGSIDLVVDKIERQIRKNKTKIAKKYREKIPASQVFTTEFEAEPDEEAVSQRIVRTKNVNLKPMDVEEALLQMELLGHDFFIYTDAEDNTTNVLYKREDGELGLIEAKGN |
2YWQ Chain:A ((4-93)) | ---YKLIGRNLEITDAIRDYVEKKLARLDRY--QDGELMAKVVLSLAG----KARAEIQVDLPGGLVRVEEEDADLYAAIDRAVDRLETQVKRFR------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7407 for 561 contacts (13.2/contact) +
2D Compatibility (PS) -8564 + (NN) 605 + (LL) 7944
1D Compatibility (HY) -800 + (ID) 1050
Total energy: 5542.0 ( 9.88 by residue)
QMean score : 0.293
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