Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDLTKIDRDLEEAKKKVADLENEKRQAEENLQ-KQIGKLYVQIQLKKDKSQSYETILDDLKTELELIKQEEKARREEAKNRQLTSSDEH
3ZUK Chain:A ((369-423))
-------------------------------ENLMGDAVGKLYVQRHF---AKSRIDTLVDNLQEAYRISISELDWMTPQTRQRALAKLNKF
General information:
TITO was launched using:
RESULT:
Template:
3ZUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9984 for 197 contacts (50.7/contact) +
2D Compatibility (PS) -5268 + (NN) -808 + (LL) 2716
1D Compatibility (HY) -4400 + (ID) 750
Total energy: 1474.0 ( 7.48 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_3ZUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZUK-query.scw
PDB file :
Tito_Scwrl_3ZUK.pdb
: