Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYLSKLSDLDPSLMDADSEQIYIPKVLFEHNDFKGLTYKEILLYSFLLNRLREPLDFIQKGYDDNEDTYVHFKVEDLCELLNQSKTTVIS---------------LKKRLAQY-GLIEEVKA----------------GSHQPNRIYLTDKLVPYIKG |
3KKS Chain:A ((58-150)) | --------------------------------------------------------------HSDNGPCFTAHRIENLCKYLGITKTTGIPYNPQSQGVVERAHRDLKDRLAAYQGDCETVEAALSLALVSLNKKRGGIGGHTPYEIYLESEHTK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1190 for 240 contacts (5.0/contact) +
2D Compatibility (PS) -6496 + (NN) -2223 + (LL) 4660
1D Compatibility (HY) -3200 + (ID) 1300
Total energy: -7369.0 ( -30.70 by residue)
QMean score : 0.199
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