Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL |
| 3C1D Chain:A ((58-134)) | -------------------------------------------------------------------------------------------RVIAWCHEHGYLDDSRFVARFIASRSRKG-YGPARIRQELNQKGISREATEKAMREADI-DWAALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIW------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8665 for 439 contacts (-19.7/contact) +
2D Compatibility (PS) -8263 + (NN) -2762 + (LL) 13144
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -10446.0 ( -23.79 by residue)
QMean score : 0.682
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