Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEE--QMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPGDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV
3FJS Chain:A ((10-106))
-------------EVASVLPLGKQLTQTPSAALFKEHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLV--
General information:
TITO was launched using:
RESULT:
Template:
3FJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59027 for 621 contacts (-95.1/contact) +
2D Compatibility (PS) -9864 + (NN) 1779 + (LL) 1372
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -73640.0 ( -118.58 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3FJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FJS-query.scw
PDB file :
Tito_Scwrl_3FJS.pdb
: