Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIVGEQEARALIKPRPKSSHKGDYGSVLLIGGFYPYGGAIIMAALACVKTGAGLVTVATQSCNIPSLHSQLPEVMAFDSDDYKW------LEKSIVQS---DVIVIGPGLGVSESSRKILNQTMEKIQSHQSVIIDGSALTLLSEGAFPQTKAKNLVLTPHQKEWERLSGIAVSQQTKENTQTALKSFPK--GTILVAKSSHTRIFQDLDEKEI--IVGGPYQATGGMGDTLCGMIAGMLAQFKEASPLDKVSVGVYLHSAIAQELSKEAYVVLPTTISDEIPKEMARLSK |
3RS8 Chain:A ((222-501)) | -VITREMVRSLLPERPRDSHKGTYGKVLIIAGSRLYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVDVVAIGPGLGNNEHVREFVNEFLKTLE--KPAVIDADAINVLDTSVLKERKSPA-VLTPHPGEMARLVKKTVG-DVKYNYELA-EEFAKENDCVLVLKSA-TTIVTD-GEKTLFNITGNTGLSKGGSGDVLTGMIAGFIAQ--GLSPLEASTVSVYLHGFAAELFEQDERGLTASELLRLIPEAIRRLK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -154649 for 2451 contacts (-63.1/contact) +
2D Compatibility (PS) -28691 + (NN) -6517 + (LL) 1176
1D Compatibility (HY) -17200 + (ID) 4800
Total energy: -210681.0 ( -85.96 by residue)
QMean score : 0.543
|
|
|