Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDKKTFEENLQELETIVSRLETGDVALEDAIAEFQKGMLISKELQRTLKEAEETLVKVMQADGTEVEMDT
3HE4 Chain:A ((18-46))
-----------AKLENIVARLENDNANLEKDIANLEKDIANLERDVA------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2000 for 106 contacts (18.9/contact) +
2D Compatibility (PS) -3224 + (NN) -1717 + (LL) 3108
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -2833.0 ( -26.73 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3HE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HE4-query.scw
PDB file :
Tito_Scwrl_3HE4.pdb
: