Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDILEIKNVNYSYANSKEKVLSGVNQKFELGKFYAIVGKSGTGKSTLLSLLAGLDKVQTGKILFKNEDIEKKGYSNH------RKNNISLVFQNYNLIDYLSPIENIRLV----------NKSVDESILFELGLDKKQIKRNVMKLSGGQQQRVAIARALVSDAPIILADEPTGNLDSVTAGEIINILKELAQDRNKCVIVVTHSKEVADSADIILELSGKKLKKVNKMNLEVE
2PCJ Chain:A ((18-212))------------------EILKGISLSVKKGEFVSIIGASGSGKSTLLYILGLLDAPTEGKVFLEGKEVD---YTNEKELSLLRNRKLGFVFQFHYLIPELTALENVIVPMLKMGKPKKEAKERGEYLLSELGLGDK-LSRKPYELSGGEQQRVAIARALANEPILLFADEPTGNLDSANTKRVMDIFLKINEG-GTSIVMVTHERELAELTHRTLEMKDGKVVGEITRV----


General information:
TITO was launched using:
RESULT:

Template: 2PCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105159 for 1365 contacts (-77.0/contact) +
2D Compatibility (PS) -19446 + (NN) -3679 + (LL) 1380
1D Compatibility (HY) -16400 + (ID) 3550
Total energy: -146854.0 ( -107.59 by residue)
QMean score : 0.594

(partial model without unconserved sides chains):
PDB file : Tito_2PCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PCJ-query.scw
PDB file : Tito_Scwrl_2PCJ.pdb: