Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKRYDEEFKQSL--------VNLYQTGKTQSELCKDYGVSTSTLAKWIKQYSQFKLEDNSVLTAKQIQELQKHNAQLEEENLILKKASAIFMQNLK
1D4E Chain:A ((416-471))
-SAYLVFDDSIRKSLKAIEGYVHLNIVKEGKTIEELAKQIDVPAAELAKTVTAYNGFVSGKDAQFERPDLPRELVVAPFYALEIAPAVHHTMGGLVIDT
General information:
TITO was launched using:
RESULT:
Template:
1D4E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6580 for 238 contacts (-27.6/contact) +
2D Compatibility (PS) -5027 + (NN) -740 + (LL) 208
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -17789.0 ( -74.74 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1D4E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D4E-query.scw
PDB file :
Tito_Scwrl_1D4E.pdb
: