Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKTALNIPFTVEGIENYYQNIKMILSLADKWSIPKDDLLLFLKGLKAIDDIKVGSPIFKYFWTSLSLQAPLKAL-EFVLEQAKMPTELSGELSETQYLVAQFSDELAP--------HD--DFWIALSQVIYDSFPGNSLAEDTVLNRKLHQFRYLISSQQAQYVRRYFK--DVGMTDRD--------ALVNYLSCLREPDNIAYYESA-------RLHNKRRRNGEIFA--------FPDDEPVINSKLLISFHTEFIIDDKGNFLNEIDAEVITSNGIINGASFNYAFKNNTRHKELDVDPVKLDPKFRNDMTRGYRSPNLSRRKWFFFKEEDYDCSYFNKKGYYAFGRRSAKQSVDKQVKYLKKAVQKMRLN |
| 3WKH Chain:A ((212-381)) | --------------------------------------------------------------WPETELAARLQALIELFLRAIYHPA--------TGHLILFFDERWRPRSRAVSFGHDIEASWLLLEAV---DVLGQATLRPRVQQASLHLARATLAEGRAPDGSLYYEIGEQGHLDTDRHWWPQAEALVGFLNAYQESGEVLFYEAAEDVWRYIRERQRDTRGGEWFARVRDDGAPYPDDKVDFWKGPYHNGRACLEAIQRLRHLLEHVRSR----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3556 for 803 contacts (-4.4/contact) +
2D Compatibility (PS) -14183 + (NN) -9622 + (LL) 10484
1D Compatibility (HY) -6800 + (ID) 2250
Total energy: -25927.0 ( -32.29 by residue)
QMean score : 0.256
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