Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLYQTNEILAKANVLVDDVNGKVSTIDPLFVAIADLSESVSDLNLQA--RHIGQKASSATSSVTKAGSALAIG---------KAASKIFRKKGDKK |
4C5L Chain:A ((83-168)) | ---------------------------------------------------TEEIIKRAGEVYEASNAQYFVVDPVMVCKGE-----NPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8110 for 408 contacts (19.9/contact) +
2D Compatibility (PS) -7589 + (NN) -2112 + (LL) 6792
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: 901.0 ( 2.21 by residue)
QMean score : 0.177
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