Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSISDIAKKAGVAKSTVSRVINHHPHVSDETRQKVMALITELDYIPNQLARDLSRGKTQKIGVVIPHTRHPYFTQLINGLLDAAKTTDYQLVMMPSDYNQELELSYLKQLKMEAIDALIFTSRAISLDIIETYAKYGR----IVVCEKLQEYNHLSSAYLDRYSSFLEAFSDMKLRGLEHLVLLFSRNNESSATYQS-ALLAYQEVYGQLSSPY---MVVGNVHDFNDGLN-LSYQLVKEVSIDGILATSDEVAAGLIKGYEESRKKCPY---IIGQECLLVGQLLK--LPTIDHKSYYLGKLAFKQALAEKISQEVLFSEFLSQDN |
| 3OQM Chain:A ((4-303)) | --TIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT---DEHVAEFKRSPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKG--HTDIAFVSGPMAEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVELPHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OQM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154593 for 2287 contacts (-67.6/contact) +
2D Compatibility (PS) -30956 + (NN) -11268 + (LL) 844
1D Compatibility (HY) -16400 + (ID) 4100
Total energy: -216473.0 ( -94.65 by residue)
QMean score : 0.501
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