Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATITVFSKNNCMQCKMTKKFLDQHGADFEEINIDEKPEKIEYVKNLGFSAAPVIEAGNVVFSGFQPSKLKELV
1R7H Chain:A ((2-72))
--SITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVVEVDGEHWSGFRPERIKQLQ
General information:
TITO was launched using:
RESULT:
Template:
1R7H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12548 for 359 contacts (-35.0/contact) +
2D Compatibility (PS) -7494 + (NN) -2312 + (LL) 352
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -29402.0 ( -81.90 by residue)
QMean score : 0.617
(partial model without unconserved sides chains):
PDB file :
Tito_1R7H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R7H-query.scw
PDB file :
Tito_Scwrl_1R7H.pdb
: