Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEML-RGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
1YDF Chain:A ((3-255))--YKGYLIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQNFNIDTPLSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVEDKEKPAYVVVGLDWQVDYEKFATATLAIQKGAHFIGTNPDLNIPTERGLLPGAGSLITLLEVATRVKPVYIGKPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIPTLLVTTGFTKAEEVAGLPIAPTHVVSSLAEWDFD--


General information:
TITO was launched using:
RESULT:

Template: 1YDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -169738 for 2175 contacts (-78.0/contact) +
2D Compatibility (PS) -28041 + (NN) -16454 + (LL) 284
1D Compatibility (HY) -32400 + (ID) 9150
Total energy: -255499.0 ( -117.47 by residue)
QMean score : 0.701

(partial model without unconserved sides chains):
PDB file : Tito_1YDF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YDF-query.scw
PDB file : Tito_Scwrl_1YDF.pdb: