Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNKKKLHGFFNFVRWLLVVLLIIVGLALVFNKPIRNAFIAHQSNHYQISRVSKKTIEKNKKSKTSYDFSSVKSISTESILSAQTKSHNLPVIGGIAIPDVEINLPIFKGLGNTELSYGAGTMKENQIMGGQNNYALASHHVFGLTGSSKMLFSPLEHAKKGMKVYLTDKSKVYTYTITEISKVTPEHVEVIDDTPGKSQLTLVTCTDPEATERIIVHAELEKTGEFSTADESILKAFSKKYNQINL |
| 4O8L Chain:A ((22-185)) | -------------------------------------------------------------------------------VLTSQWDAQKLPVIGGIAIPELEMNLPIFKGLDNVNLFYGAGTMKREQVMG-EGNYSLASHHIFGVDNANKMLFSPLDNAKNGMKIYLTDKNKVYAYEIREVKRVTPDRVDEVDDRDGVNEITLVTCEDLAATERIIVKGDLKETKDYSQTSDEILTAFNQPYKQFY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57393 for 935 contacts (-61.4/contact) +
2D Compatibility (PS) -17521 + (NN) -5092 + (LL) 6328
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -98778.0 ( -105.64 by residue)
QMean score : 0.428
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