Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYYFIYLIKVIGNGLKLSLICGLNWLIKIVFKGQFYLFSAVFCGLLTYYMPQDIQLFTVRVLELIIMLKVIIDVTHTALSRDFKRMKTPLFLGVMYVFFLAGNSYIKAHLLTEVMVNHLISFWLISLFFATLVIVIQPRLFKHYLLKKVIDKEYLGIRKFTDSLPPEINLYKDADEEDADKRMR---LINQNVIKHPYQEVVELSFLNREVITAIGYKAVPFEKETERTFIDDDTIYYPIFTVHPFRNLEGKSDFYHILMKLKLSRKAAFTKNGERLLIRDF
4OPU Chain:A ((162-202))--------------------------------------------------------------------------------------------------------------------------------------------------------------RSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGMGYPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIV


General information:
TITO was launched using:
RESULT:

Template: 4OPU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1841 for 118 contacts (-15.6/contact) +
2D Compatibility (PS) -3893 + (NN) -1793 + (LL) 16360
1D Compatibility (HY) -2000 + (ID) 750
Total energy: 6083.0 ( 51.55 by residue)
QMean score : 0.345

(partial model without unconserved sides chains):
PDB file : Tito_4OPU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OPU-query.scw
PDB file : Tito_Scwrl_4OPU.pdb: