Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITGIINLKKEAGMTSHDAVFKLRKILHTKKIGHGGTLDPDVVGVLPIAVGKATRVIEYMTESGKIYEGEITLGYATSTEDSSGEVISRTPLTQSDLSEDVVDHAMKSFTGPITQVPPMYSAVKVNGKKLYEYARSGEEVERPKRQITISEFRRTSPLYFEKGICRFSFYVSCSKGTYVRTLAVDLGIKLGYASHMSFLKRTSSAGLSITQSLTLEEINEKYKQEDFSFLLPIEYGVLDLPKVNLTEEDKVEISYGRRILLENEADTLAAF-YENRVIAILEKRGNEFKPHKVLL |
1SGV Chain:A ((7-290)) | ---GIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAKH--LTIEAIDAAMERLRGEI----------------------------LEARPIRIDRFELLAARRRDQ-LIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQARSLDDLAERPA---LSLSLD-EACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128518 for 2042 contacts (-62.9/contact) +
2D Compatibility (PS) -26570 + (NN) -748 + (LL) 2376
1D Compatibility (HY) -15600 + (ID) 4400
Total energy: -173460.0 ( -84.95 by residue)
QMean score : 0.463
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