Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEKEKMLAGQYYRPSAPELRKDREVALKNMQAFNN--EDNSSKRNVILQKWFGATGKSIHMEQRFVCDYGCNIYVGENFYANFNQTFLDVCEIRIGDNCMFGPNCQLLTPLHPLDPIERNSGLEYGAPIQIGNNVWLGGGVTILPGVVLGDNVVVGAGSVVTKSFENNVVIAGNPAKIIKKLA
4ISX Chain:A ((5-186))
-TEKEKMLSGKGYYANDELLVKEREYCKKLTRLFNNTLEDEYEKREDILRQLFGSVGKQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGDNVVIGAGSVVTKDIPPNTVAVGNPCRVIKKIE
General information:
TITO was launched using:
RESULT:
Template:
4ISX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126734 for 1396 contacts (-90.8/contact) +
2D Compatibility (PS) -19930 + (NN) -9306 + (LL) 208
1D Compatibility (HY) -18000 + (ID) 5100
Total energy: -178862.0 ( -128.12 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_4ISX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ISX-query.scw
PDB file :
Tito_Scwrl_4ISX.pdb
: