Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQIKLTPEELRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQLLKVADIIEQTDADIASQISG
2VRZ Chain:A ((4-94))
-AMIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQEQDQQLSNNFGL
General information:
TITO was launched using:
RESULT:
Template:
2VRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8699 for 510 contacts (-17.1/contact) +
2D Compatibility (PS) -9779 + (NN) -944 + (LL) 208
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -28114.0 ( -55.13 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2VRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VRZ-query.scw
PDB file :
Tito_Scwrl_2VRZ.pdb
: