Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKTIQKELEGLDIRFDEPLKKYTYTKVGGPADYLAFPRNRLELSRIVKFANSQNIPWMVLGNASNIIVRDGGIRGFVI-MFDKLSTVTVNGYVIEAEAGANLIETTRIARYHSLTGFEFACGIPGSVGGAVFMNAGAYGGEIAHILLSAQVLTPQGELKTIEARNMQFGYRHSVIQESGDIVISAKFALKPGDHLMITQEMDRLTYLRELKQPLEYPSCGSVFKRPPGHFAGQLISEAHLKGQRIGGVEVSQKHAGFMVNIAEGSAQDYENLIEHVINTVESTSGVHLEPEVRIIGESLL
2GQT Chain:A ((11-254))-------------------LKDYTTLGVGGPAELWTV-ETREELKR------ATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDLKGWV---GAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFH-DGAFHVYCPEELGFGYRKSHLPPGG-IVTRVRLKLKERPKEEILRRMAEVDRARK-GQP-KRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEELPLELEWEVWP----------


General information:
TITO was launched using:
RESULT:

Template: 2GQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132415 for 1958 contacts (-67.6/contact) +
2D Compatibility (PS) -25610 + (NN) -2893 + (LL) 3144
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -176874.0 ( -90.33 by residue)
QMean score : 0.485

(partial model without unconserved sides chains):
PDB file : Tito_2GQT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GQT-query.scw
PDB file : Tito_Scwrl_2GQT.pdb: