Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDELKKLAGVTAAKYVKNGMIVGLGTGSTAYFFVEEIGRRVKE-EGLQVVGVTTSNRTTEQARGLGIPLKSADDIDVIDVTVDGADEVDPDFNGIKGGGGALLMEKIVATPTKEYIWVVDESKLVETLGA-FKLPVEVVRYGSERL---FRVFKSKGYCPSFRETEGDRFITDMGNYIIDLDLKKIEDPKQLANELDHTVGVVEHGLFNSMVNKVIVAGKNGLDILEK
1LK7 Chain:A ((3-229))
VEEMKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSIFNAKAELRMGVNKDG-PVITDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREGVKKLER
General information:
TITO was launched using:
RESULT:
Template:
1LK7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90607 for 1930 contacts (-46.9/contact) +
2D Compatibility (PS) -23981 + (NN) -7327 + (LL) -76
1D Compatibility (HY) -21200 + (ID) 4500
Total energy: -147691.0 ( -76.52 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1LK7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LK7-query.scw
PDB file :
Tito_Scwrl_1LK7.pdb
: