Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDLSKALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETE-SQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
| 3E8P Chain:A ((15-65)) | ---------------------------------------------------------------------------------------------------------------------IQAEVLKRVAEVFDQHVPFHNLLGLDIKRYDIDGVEVAINMKPE--LIGNIHQQILHGGVTATVLDVVGGLTAFAGLVASRDDWTIEELQQRLQTLGTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2271 for 221 contacts (-10.3/contact) +
2D Compatibility (PS) -5040 + (NN) 276 + (LL) 7496
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -2039.0 ( -9.23 by residue)
QMean score : 0.362
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