Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIDILTLFPEMFAPL-EHSIVGKAKERGLLEINYHNFRE-NAEKSRHVDDEPYGGGQGMLLRAQPIFDTID---KIDAQKARVILLDPAGRTFDQDFAEELSKEDELIFICGHYEGYDER-IKSLVTDEVSLGDFVLTGGELAAMTMVDATVRLIPEVIGKETSHQDDSFSSGLLEYPQYTRPYDYLGMTVPDVLMSGHHENIRKWRLEQSLRKTLERRPDLLENYAMTDEERLILEKIKTEIERTDTVNEQNNL
1UAM Chain:A ((21-263))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQA--EEDSFADGLLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLALTDEQRKLLKEAQAEHNSLEHH------
General information:
TITO was launched using:
RESULT:
Template:
1UAM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128002 for 1665 contacts (-76.9/contact) +
2D Compatibility (PS) -25505 + (NN) -12172 + (LL) 452
1D Compatibility (HY) -24000 + (ID) 6050
Total energy: -195277.0 ( -117.28 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1UAM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UAM-query.scw
PDB file :
Tito_Scwrl_1UAM.pdb
: