Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYL-YNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVT-KSDQPKEKITITSIKVIKDYKFK |
2OJU Chain:A ((9-160)) | -----------------------------------------------------------------------------VTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKK---------FEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQ------------------------PHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2OJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55349 for 1145 contacts (-48.3/contact) +
2D Compatibility (PS) -15905 + (NN) -5109 + (LL) 6800
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -88513.0 ( -77.30 by residue)
QMean score : 0.546
|
|
|