Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKTEHHKMEYVFETIKAITKTNPKVEQIKDLPAIHYLGQSEQVIP----ILSGGGSGHEPAHFGYVGEGMLSAAISGPIFVPPCASDILETIRFINRGKGVFVIIKNFEADLEEFSQAIEQARQEGIPIKYIVSHDDISVETSNFKIRNRGVAGTVLLHKIIGQAALEGASLDELEQLGLSLTTSMATLGVASKSATILGQHQPVFDLEEGYISFGIGIHGEPGYRTMPFVSMEHLANELVNKLKMK------LR--------WQD----------GEAFILLINNLGGSSKMEELLFTNAVMEFLALDDLQLPFIKTGHLITSLDMAGLSVTLCRVKDSRWIDYLKHKTDARAW |
| 4LRY Chain:A ((1-337)) | MKKLINDVQDVLDEQLAGLAKAHPSLTLHQD-PV--YVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFLSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDDETLALWDAPVHTPALN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173280 for 2714 contacts (-63.8/contact) +
2D Compatibility (PS) -33773 + (NN) -18004 + (LL) 424
1D Compatibility (HY) -23600 + (ID) 5700
Total energy: -253933.0 ( -93.56 by residue)
QMean score : 0.523
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