Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIELKGVNFKYKNTKNSCLDNIDLEIKKGEFVLISGASGSGKTSITRVI-NKLIPYYYEGELEGTVKINNDLVSSYQMFELSEIVGSVFQNP-----RTQFFNVDTNSEIVFGLENQGVSRDILKKRLKETCETLDINKLQNRNIFHLSGGEKQKIAFASVYAMNPDIYLLDEPSSNLDI-PTIEVLKRHLSVLKNSGKTVIISEHRIY---YLMDLVDKVIYMKN---GQIQKSYSKEDFLN-------------LSEDEIKAMALRCRKKTKLNIEMSNNEKHPYLQV----NDFSIYRKDNCIINNMNFSANKGDIVAVIGSNGVGKTTFLRTLCGLHDNYKGDVLLNSKKTDAKKRRQ-KNYMVMQDVNYQLFAESVFAECKLGIENVSDDLIEEILNEFDLSDYKNNHPNTLSGGQKQRLAIAVGLICKKEIFVLDEPTSGLDYTNMVKTVELLKRYSKDK--IIFIATHDTEFANLICNRVLDLEK |
| 3OZX Chain:A ((30-457)) | ---------------------------------VLGKNGVGKTTVLKILAGEIIPNF--GDPNSKVG-KDEVLKRFRGKEIYNYFKELYSNELKIVHKIQY--VEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELLKN--KYVIVVDHDLIVLDYLTDLI-HIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMKIRPDEIKFM---LK----------LKTKMKWTKIIKKLGDFQL------VVDNG--EAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKPQRIFPNY----DGTVQQYLENASKDAL----STSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139847 for 2990 contacts (-46.8/contact) +
2D Compatibility (PS) -40579 + (NN) -6519 + (LL) 4896
1D Compatibility (HY) -24400 + (ID) 5750
Total energy: -212199.0 ( -70.97 by residue)
QMean score : 0.365
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