Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNHKFLQVLKYEGVVSITSWTELAPHVTNTWNSYLTITDDQRILAPAAGMTHLENDLNNNSKIIMTLGSREVEGRDGYQGTGFRIEGTAKLLEAGSDFEIVKKKYPFLRKVLEVTPINVIQLL
3A20 Chain:A ((1-120))
MLPGTFFEVLKNEGVVAIATQGEDGPHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNG-PGTGFLIRGSAAFRTDGPEFEAI-ARFKWARAALVITVVSAEQTK
General information:
TITO was launched using:
RESULT:
Template:
3A20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78004 for 895 contacts (-87.2/contact) +
2D Compatibility (PS) -12898 + (NN) -5390 + (LL) 156
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -107936.0 ( -120.60 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_3A20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A20-query.scw
PDB file :
Tito_Scwrl_3A20.pdb
: