Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLKQAFIENDSIRLKLSASDWKEAIKLSIDPLIESGAVDAEYYDAIIESTEEFGPYYILMPGMAMPHARPEAGVKRDAFSLITLTEPVVFPDGKE-VSVLLALAATSSAIHTSVAIPQIIALFELENSIQRLTECQEAKEVLAMVEESKNSPYLEGLDLES
2OQ3 Chain:A ((1-111))
MRLSDYFPES-SISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQAIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIGLSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISRG--------------
General information:
TITO was launched using:
RESULT:
Template:
2OQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61266 for 841 contacts (-72.8/contact) +
2D Compatibility (PS) -11597 + (NN) -3266 + (LL) 1608
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -86521.0 ( -102.88 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2OQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OQ3-query.scw
PDB file :
Tito_Scwrl_2OQ3.pdb
: