Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIDKLVKASHLIDMNDIIREGNPTLRKVAEEVTFPLSEKEEILGEKMMQFLKHSQDPIMAEKLGLRGGVGLAAPQLDISKRIIAVLVPNVEDAQGNPPKEAYSLQEVMYNPKVVSHSVQDAALSDGEGCLSVDREVPGYVVRHARVTIEYFDKTGEKHRLKLKGYNSIVVQHEIDHIDGIMFYDRINEKNPFAVKEGLLILE
2AIA Chain:A ((2-203))
-SAIERISKAAHLIDMCDIIREGNPSLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPN-----------AYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE
General information:
TITO was launched using:
RESULT:
Template:
2AIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98935 for 1522 contacts (-65.0/contact) +
2D Compatibility (PS) -20112 + (NN) -2887 + (LL) 328
1D Compatibility (HY) -27600 + (ID) 8200
Total energy: -157406.0 ( -103.42 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2AIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AIA-query.scw
PDB file :
Tito_Scwrl_2AIA.pdb
: