Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRTVSKLVINNLDLYYGEFHALKDVNLDIEEKEITAFIGPSGCGKSTLLKSINRMNDLVKNCKITGDITLEGEDVYRQLDINQLRKKVGMVFQKPNPFP-MSIYDNVAFGPRT--HGIHSKAELDDIVERSLKQAALWDEV--KDRLHKSALGMSGGQQQRLCIARALAIEPDVLLMDEPTSALDPISTAKIEELVIQL-KKNYTIVIVTHNMQQAVRISDKTAFFLMGEVVEYNKTSQLFSLPQDERTENYITGRFG |
2OLK Chain:A ((22-263)) | ----LQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDT----NLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEA--------KAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90232 for 1911 contacts (-47.2/contact) +
2D Compatibility (PS) -25463 + (NN) -6669 + (LL) 1244
1D Compatibility (HY) -18800 + (ID) 4700
Total energy: -144620.0 ( -75.68 by residue)
QMean score : 0.403
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