Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKRIWYLIIIITVILGGLVMKNLFATTGESSKKQEQDRVVKYIKQHVELTNGEPVNQIEFVEFEK--NQMTGSWLLTSKINNKFFISFKIDEFGGEIRTSNYKANEFNVNSEKQNIKSNNKLEVSYVEDN |
3BWU Chain:D ((15-44)) | --------------------------------------------------------AVADLSRFENGQELPPGTYRVDIYLNNGYMATRDVTFNTGDSEQGIVPCLTRAQLASMGLNTASVAGMNLLADDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BWU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2195 for 89 contacts (24.7/contact) +
2D Compatibility (PS) -3093 + (NN) 11 + (LL) 5048
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 2711.0 ( 30.46 by residue)
QMean score : 0.132
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