Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANPISIDTEMITLGQFLKLADVIQSGGMAKWFLSEHEVLVNDEPDNRRGRKLYVG--DVVEIEGFGSFQVVN
2CQJ Chain:A ((107-166))
---------SGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKI----
General information:
TITO was launched using:
RESULT:
Template:
2CQJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26797 for 374 contacts (-71.6/contact) +
2D Compatibility (PS) -5918 + (NN) -791 + (LL) 912
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -34244.0 ( -91.56 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_2CQJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQJ-query.scw
PDB file :
Tito_Scwrl_2CQJ.pdb
: