Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQ-TYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK |
| 4NCJ Chain:A ((1-298)) | MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILV-GLYWPLRIKDIKK-----DEFTKVGAR------DTYIDLIFEKDGTKYRIT---RRFLKGYSS----------------GEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILE--SDEAREKVVREVLNL------------------------------KYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGERIALGLAFELAMSLYLA---GEISLLILDEPTPYLDEERRRKLITIME----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14336 for 1965 contacts (-7.3/contact) +
2D Compatibility (PS) -27943 + (NN) -4232 + (LL) 8736
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -58125.0 ( -29.58 by residue)
QMean score : 0.339
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