Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIKKCKQLLMSLVVLTLAVTCLAPMSKAKAASDPIDINASAAIMIEASSGKILYSKNADKRLPIASMTKMMTEYLLLEAIDQGKVKWDQTYT--PDDYVYEISQDNSLSNVPLRKDGKYTVKELYQATAIYSANAAAIAIAEIVAGSETKFVEKMNAKAKELGLTDYKFVNATGLENKDLHGHQPEGTSVNEESEVSAKDMAVLADHLITDYPEILETSSIAKTKFREGTDDEMDMPNWNFMLKGLVSEYKKATVDGLKTGSTDSAGSCFTGTAERNGMRVITVVLNAKGNLHTGRFDETKKMFDYAFDNF-SMKEIYAEGDQVKGHKTISVDKGKEKEVGIVTNKAFSLPVKNGEEKNYKAKVTLNKDNLTAPVKKGTKVGKLTAEYTGDEKDYGFLNSDLAGVDLVTKENVEKANWFVLTMRSIGGFFAGIWGSIVDTVTGWF |
| 3ITA Chain:A ((11-351)) | -------------------------------------VDARAWILMDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKADKIKLTDMVTVGKDAWATGNPALRGSSVMFLKPGDQVSVADLNKGVIIQSGNDACIALADYVAGSQESFIGLMNGYAKKLGLTNTTF--------QTVHGLDAPG------QFSTARDMALLGKALIHDVPE-----EYAIHKEKEFTFNKIRQPNRNRLLWS-----SNLNVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRI--RFNESEKLLTWGFRFFETVTPIKPDATFV----TQRVWFGDKSEVNLGAGEAGSVTIPRGQLKNLKASYTLTEPQLTAPLKKGQVVGTI---------DFQLNGKSIEQRPLIVMENVEEG----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ITA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89270 for 2901 contacts (-30.8/contact) +
2D Compatibility (PS) -36486 + (NN) -12097 + (LL) 7308
1D Compatibility (HY) -23200 + (ID) 6200
Total energy: -159945.0 ( -55.13 by residue)
QMean score : 0.540
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