Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV
4WXY Chain:B ((1-189))
-MKIGVLGLQGAVREHVRAIEACGAEAVIVKKSEQLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGT-AGLILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELSIKGV-DGFVGVFIRAPHIVEAGDGVDVLATYNDRIVAARQGQFLGCSFNPELTDDHRLMQYFLNMVKEA------
General information:
TITO was launched using:
RESULT:
Template:
4WXY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159110 for 1606 contacts (-99.1/contact) +
2D Compatibility (PS) -19693 + (NN) -2458 + (LL) 948
1D Compatibility (HY) -24400 + (ID) 6600
Total energy: -211313.0 ( -131.58 by residue)
QMean score : 0.634
(partial model without unconserved sides chains):
PDB file :
Tito_4WXY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WXY-query.scw
PDB file :
Tito_Scwrl_4WXY.pdb
: