Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEHHIPKNSIITVAGTVGVGKSTLTKTLAK-------------------RLGFKTSLEEVDHNPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFE----AGGGFVQ--DRSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPYFPHPDV--LIYLEGDLENILNRIEQRGREMELQTSRSYWEEMHTRYENWI---------SGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHDNQKK |
| 2OCP Chain:A ((5-240)) | -----------LSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQ------------LGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQD-WHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVND-DFSEEVTKQEDLMREVNTFVKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80338 for 1349 contacts (-59.6/contact) +
2D Compatibility (PS) -20065 + (NN) -5337 + (LL) 1948
1D Compatibility (HY) -17200 + (ID) 2700
Total energy: -123692.0 ( -91.69 by residue)
QMean score : 0.437
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