Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGGMGNMQKMMKQMQKMQKDMAKAQEELAEKVVEGTAGGGMVTVKANGQKEILDVIIKEEVVDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMNMPGLF
5CE8 Chain:A ((63-105))
------HMERLLRSAKIIGLDVPYTAEELSKAVVE--------TVRANGFKE--DLYIR------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
5CE8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2839 for 200 contacts (14.2/contact) +
2D Compatibility (PS) -4801 + (NN) -4265 + (LL) 3720
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -7757.0 ( -38.79 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_5CE8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5CE8-query.scw
PDB file :
Tito_Scwrl_5CE8.pdb
: