Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGFLRKKTLRREFDEKLTEQLFKQKEEWNRQKKLVEKSLEPSA---EVLYELKVAEAKYFFYLREAKQRNLKISRWK
1QVR Chain:A ((441-498))
---------------KLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQY------------------
General information:
TITO was launched using:
RESULT:
Template:
1QVR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7500 for 152 contacts (49.3/contact) +
2D Compatibility (PS) -4733 + (NN) -4845 + (LL) 3084
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -1794.0 ( -11.80 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_1QVR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QVR-query.scw
PDB file :
Tito_Scwrl_1QVR.pdb
: