Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEGAEQIISEIQNQLQNLK
1Z0R Chain:A ((1-53))
--MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMT-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18314 for 243 contacts (-75.4/contact) +
2D Compatibility (PS) -5546 + (NN) -848 + (LL) 3088
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -32670.0 ( -134.44 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_1Z0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z0R-query.scw
PDB file :
Tito_Scwrl_1Z0R.pdb
: