Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAKASSDVKPGDELTV-------RFGQKLVTVQVNE---LKDTTKKEEAANMYTILKEEKLGE
3DH3 Chain:A ((7-98))
VRLNKYISESGICSRRE-ADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSK---
General information:
TITO was launched using:
RESULT:
Template:
3DH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3047 for 479 contacts (-6.4/contact) +
2D Compatibility (PS) -8506 + (NN) 1175 + (LL) 284
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -19044.0 ( -39.76 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_3DH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DH3-query.scw
PDB file :
Tito_Scwrl_3DH3.pdb
: