Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGV---GVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKP-EILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
1HW7 Chain:A ((7-234)) | -DQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVA---RVQGEIPENA--DLKTLVG-NGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGDVDGKP-----AAGGMLLQVMPAQNAQQ-DDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKCTC------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83414 for 1563 contacts (-53.4/contact) +
2D Compatibility (PS) -23916 + (NN) -3105 + (LL) 4904
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -119531.0 ( -76.48 by residue)
QMean score : 0.435
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