Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAEIWGRRIRAFRKLKGYTQEGFAKALGISVSILGEIERGNRLPSAAIIQDAADVLNISADELAPPEK
1Y7Y Chain:A ((14-72))
-----FGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPREL-----
General information:
TITO was launched using:
RESULT:
Template:
1Y7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32989 for 411 contacts (-80.3/contact) +
2D Compatibility (PS) -6525 + (NN) -2435 + (LL) 796
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -45103.0 ( -109.74 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7Y-query.scw
PDB file :
Tito_Scwrl_1Y7Y.pdb
: