Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVK-QEKIVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRVQ-DLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEAERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV
4NAL Chain:A ((4-226))-SVSVILLAGG---------PKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEY--EESIDVDLSFAIPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGAAVLGVPAKATIKEVNSDSLVVKT----TLWEMQTPQVIKPELLKKGFELVKSEGLEVTDDVSIVEYLK-HPVYVSQGSYTNIKVTTPDDLLLAERILSE-------


General information:
TITO was launched using:
RESULT:

Template: 4NAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122746 for 1629 contacts (-75.4/contact) +
2D Compatibility (PS) -22661 + (NN) -9940 + (LL) 1144
1D Compatibility (HY) -19200 + (ID) 3900
Total energy: -177303.0 ( -108.84 by residue)
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4NAL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NAL-query.scw
PDB file : Tito_Scwrl_4NAL.pdb: