Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3F0F Chain:A ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3F0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116014 for 1324 contacts (-87.6/contact) +
2D Compatibility (PS) -16818 + (NN) -10936 + (LL) 36
1D Compatibility (HY) -14400 + (ID) 4800
Total energy: -162932.0 ( -123.06 by residue)
QMean score : 0.649
(partial model without unconserved sides chains):
PDB file :
Tito_3F0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0F-query.scw
PDB file :
Tito_Scwrl_3F0F.pdb
: