Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEFDTIKDSKQLNGLALAYIGDAIFEVYVRHHLLKQGFTKPNDLHKKSSRIVSAKSQAEILFFLQNQS------FFTEEEEAVLKRGRNAKSGTTPKNTDVQTYRYSTAFEALLGYLFLEKKEERLSQLVAEAIQFGTSGRKTNESAT
1O0W Chain:A ((53-155))
-----------------LEFLGDAVLELFVCEILYKK---YPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSI--------------LADAFEALLAAIYLDQGYEKIKELFEQEFEF------------
General information:
TITO was launched using:
RESULT:
Template:
1O0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22918 for 625 contacts (-36.7/contact) +
2D Compatibility (PS) -10421 + (NN) -4584 + (LL) 1568
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -47005.0 ( -75.21 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1O0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O0W-query.scw
PDB file :
Tito_Scwrl_1O0W.pdb
: