Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQS----YTGNRVIVVFDAHL----VKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
4JGC Chain:A ((94-156))
---------------PGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIP----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4JGC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15899 for 266 contacts (-59.8/contact) +
2D Compatibility (PS) -5829 + (NN) -1255 + (LL) 10152
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -19331.0 ( -72.67 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_4JGC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JGC-query.scw
PDB file :
Tito_Scwrl_4JGC.pdb
: