Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDK--------REKLSNKPEKGHVAKAETAPKRFVKELRGVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKGFQGAIKRHGQSRGPMSHGSRYHRRPGSMG-PVDPNRVFKGKLLPGRMGGEQITVQNLEIVKVDAERNLLLIKGNVPGAKKSLITVKSAVKSK
4WF9 Chain:B ((2-216))
-TKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDAYEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGAIKRHGQSRGPMSHGSHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVDTENKVILVKGNVPGPKKGLVEIRTSIK--
General information:
TITO was launched using:
RESULT:
Template:
4WF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27486 for 1379 contacts (-19.9/contact) +
2D Compatibility (PS) -21904 + (NN) -3587 + (LL) 244
1D Compatibility (HY) -21200 + (ID) 7100
Total energy: -81033.0 ( -58.76 by residue)
QMean score : 0.291
(partial model without unconserved sides chains):
PDB file :
Tito_4WF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WF9-query.scw
PDB file :
Tito_Scwrl_4WF9.pdb
: